Biospecimen collection including processing and purpose
Specimen collection | Sample type | Location | Processing details | Purpose |
EDTA vacutainers | Whole blood | Local clinical lab | None | Complete blood count analysis |
Whole blood | UW NORC* | None | Testing for HbA1c | |
Plasma | UW NORC* | Processed locally at data site on the day of collection | Testing for NT-proBNP, troponin-T, C-peptide and insulin | |
Plasma | Biobanking at UAB CCTS | Processed locally at data site on the day of collection | Future proteomics and metabolomics studies | |
Buffy coats | Biobanking at UAB CCTS | Processed locally at data site on the day of collection | DNA extractions for future genomics | |
Serum separator vacutainers | Serum | Biobanking at UAB CCTS | Processed locally at data site on the day of collection | Future proteomics and metabolomics studies |
Serum | UW NORC* | Processed locally at data site on the day of collection | Testing for CRP-HS, glucose, BUN, creatinine, carbon dioxide, total protein, albumin, globulin, bilirubin, alkaline phosphatase, AST, ALT, electrolytes and lipids | |
Urine collection kit | Urine | UW NORC* | Processed locally at data site on the day of collection | Testing for creatinine and albumin |
CPT mononuclear cell preparation tubes | Peripheral blood mononuclear cells | Biobanking at UAB CCTS | UAB—processed locally on day of collection UCSD/UW—tubes sent to UAB for next-day processing | Future immunological studies; generation of iPSCs |
PAXgene RNA vacutainers | Stabilised, unisolated RNA | Biobanking at UAB CCTS | UAB—processed locally on day of collection UCSD/UW—tubes sent to UAB for next-day processing | Future gene expression studies |
*Samples analysed by the UW NORC laboratory (serum, plasma, whole blood and urine) are first stored locally at UAB and UCSD at −70°C, then batch-shipped to UW on dry ice approximately once per quarter.
ALT, alanine aminotransferase; AST, aspartate aminotransferase; BUN, blood urea nitrogen; CRP-HS, C reactive protein, high sensitivity; Electrolytes, sodium, potassium, chloride, calcium; Lipid analysis, total cholesterol, high-density lipoprotein cholesterol, low-density lipoprotein cholesterol, triglycerides; NT-proBNP, N-terminal pro-B-type natriuretic peptide; UAB, University of Alabama at Birmingham; UAB CCTS, University of Alabama at Birmingham Centre for Clinical and Translational Science; UCSD, University of California, San Diego; UW, University of Washington; UW NORC, University of Washington Nutrition Obesity Research Center.