Table 3

Biospecimen collection including processing and purpose

Specimen collectionSample typeLocationProcessing detailsPurpose
EDTA vacutainersWhole bloodLocal clinical labNoneComplete blood count analysis
Whole bloodUW NORC*NoneTesting for HbA1c
PlasmaUW NORC*Processed locally at data site on the day of collectionTesting for NT-proBNP, troponin-T, C-peptide and insulin
PlasmaBiobanking at UAB CCTSProcessed locally at data site on the day of collectionFuture proteomics and metabolomics studies
Buffy coatsBiobanking at UAB CCTSProcessed locally at data site on the day of collectionDNA extractions for future genomics
Serum separator vacutainersSerumBiobanking at UAB CCTSProcessed locally at data site on the day of collectionFuture proteomics and metabolomics studies
SerumUW NORC*Processed locally at data site on the day of collectionTesting for CRP-HS, glucose, BUN, creatinine, carbon dioxide, total protein, albumin, globulin, bilirubin, alkaline phosphatase, AST, ALT, electrolytes and lipids
Urine collection kitUrineUW NORC*Processed locally at data site on the day of collectionTesting for creatinine and albumin
CPT mononuclear cell preparation tubesPeripheral blood mononuclear cellsBiobanking at UAB CCTSUAB—processed locally on day of collection


UCSD/UW—tubes sent to UAB for next-day processing
Future immunological studies; generation of iPSCs
PAXgene RNA vacutainersStabilised, unisolated RNABiobanking at UAB CCTSUAB—processed locally on day of collection


UCSD/UW—tubes sent to UAB for next-day processing
Future gene expression studies
  • *Samples analysed by the UW NORC laboratory (serum, plasma, whole blood and urine) are first stored locally at UAB and UCSD at −70°C, then batch-shipped to UW on dry ice approximately once per quarter.

  • ALT, alanine aminotransferase; AST, aspartate aminotransferase; BUN, blood urea nitrogen; CRP-HS, C reactive protein, high sensitivity; Electrolytes, sodium, potassium, chloride, calcium; Lipid analysis, total cholesterol, high-density lipoprotein cholesterol, low-density lipoprotein cholesterol, triglycerides; NT-proBNP, N-terminal pro-B-type natriuretic peptide; UAB, University of Alabama at Birmingham; UAB CCTS, University of Alabama at Birmingham Centre for Clinical and Translational Science; UCSD, University of California, San Diego; UW, University of Washington; UW NORC, University of Washington Nutrition Obesity Research Center.